STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11335.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
AFZ11336.1
KEGG: ava:Ava_C0191 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
AFZ11334.1
Transposase; COGs: COG5421 Transposase; KEGG: mar:MAE_26870 transposase; SPTR: Transposase.
       0.440
AFZ11337.1
KEGG: cyt:cce_5210 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.435
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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