STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11448.1Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Trypsin; Tetratricopeptide repeat; COGs: COG0457 FOG: TPR repeat; InterPro IPR001254:IPR001440:IPR013105:IPR019734; KEGG: mar:MAE_03780 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Peptidase S1/S6, chymotrypsin/Hap; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat protein. (1192 aa)    
Predicted Functional Partners:
AFZ12386.1
PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase family associated with various cellular activities (AAA); COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894:IPR003959; KEGG: npu:Npun_F4201 ribulose bisphosphate carboxylase, small chain; PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase, AAA-type, core; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose 1,5-bisphosphate carboxylase/oxygenase activase.
    
 0.885
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.859
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.821
AFZ15158.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013105; KEGG: bhy:BHWA1_01798 TPR domain-containing protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR domain-containing protein.
 
 
 0.739
AFZ11287.1
Ankyrin; InterPro IPR002110; KEGG: tca:655990 similar to CG4719-PA; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Putative uncharacterized protein.
   
 0.704
AFZ11667.1
Ankyrin; InterPro IPR002110; KEGG: ava:Ava_3104 ankyrin; PFAM: Ankyrin repeat; SPTR: Ankyrin.
   
 0.704
AFZ13527.1
Hypothetical protein; PFAM: Ankyrin repeat; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: ana:all2748 hypothetical protein; SPTR: Ankyrin.
   
 0.704
AFZ14844.1
PFAM: Mov34/MPN/PAD-1 family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: npu:Npun_F2019 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family protein.
   
  0.661
AFZ12133.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR003018:IPR003661:IPR003594:IPR 000014:IPR013767; KEGG: npu:Npun_R6464 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-bi [...]
  
 
 0.633
AFZ12486.1
Amino acid adenylation domain protein; PFAM: Male sterility protein; Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Condensation domain; PilZ domain; TIGRFAM: amino acid adenylation domain; thioester reductase domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020806:IPR000873:IPR013217:IPR006163:IPR 001242:IPR009875:IPR013120:IPR010071:IPR010080; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Methyltransferase type 12; Phosphopantetheine-binding [...]
  
 
 0.633
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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