STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11465.1Hypothetical protein. (48 aa)    
Predicted Functional Partners:
AFZ11464.1
Hypothetical protein.
       0.757
AFZ11466.1
PFAM: N-6 DNA Methylase; KEGG: npu:Npun_BF091 putative type II DNA modification enzyme; SPTR: Putative type II DNA modification enzyme.
       0.705
AFZ11467.1
PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); InterPro IPR003593; KEGG: npu:Npun_BF090 helicase domain-containing protein; SMART: ATPase, AAA+ type, core; SPTR: Helicase domain protein.
       0.705
AFZ11468.1
Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: cyj:Cyan7822_6518 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region.
       0.705
AFZ11469.1
PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR006120; KEGG: cyj:Cyan7822_6519 resolvase domain-containing protein; PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix domain; SMART: Resolvase, N-terminal; SPTR: Putative transposase.
       0.705
AFZ11462.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG2402 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: amr:AM1_4808 hypothetical protein; PFAM: PilT protein, N-terminal; SPTR: Putative uncharacterized protein.
       0.542
AFZ11463.1
PFAM: Protein of unknown function (DUF2281); KEGG: mar:MAE_03590 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.542
AFZ11461.1
KEGG: npu:Npun_BF093 DEAD/DEAH box helicase domain-containing protein; SPTR: DEAD/DEAH box helicase domain protein.
       0.507
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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