STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcT-2Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (196 aa)    
Predicted Functional Partners:
cpcS
Homodimeric phycobilin lyase, CpcS-III family; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.852
AFZ12699.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: ana:alr0532 phycocyanobilin lyase alpha subunit; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat; SPTR: Phycocyanin lyase alpha subunit.
 
   
 0.843
AFZ12695.1
Phycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, beta subunit; InterPro IPR012128:IPR006247; KEGG: tel:tlr1957 phycocyanin beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: C-phycocyanin beta subunit; TIGRFAM: Phycocyanin, beta subunit.
  
   
 0.828
AFZ12696.1
Phycocyanin, alpha subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, alpha subunit; InterPro IPR012128:IPR006246; KEGG: tel:tlr1958 phycocyanin alpha subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: C-phycocyanin alpha subunit; TIGRFAM: Phycocyanin, alpha subunit.
  
   
 0.821
AFZ12817.1
Allophycocyanin alpha subunit apoprotein; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyn:Cyan7425_4994 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin alpha subunit.
  
   
 0.820
AFZ12816.1
PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR006245:IPR012128; KEGG: ava:Ava_2622 allophycocyanin subunit beta; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin, beta subunit; TIGRFAM: Allophycocyanin, beta subunit.
  
   
 0.819
AFZ12700.1
HEAT domain containing protein; PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155:IPR000357; KEGG: ava:Ava_2935 heat repeat-containing PBS lyase; PFAM: HEAT; PBS lyase HEAT-like repeat; SPTR: Phycocyanin lyase beta subunit.
  
   
 0.817
AFZ12701.1
PFAM: Phycobilisome Linker polypeptide; InterPro IPR001297; KEGG: tel:tlr1963 phycobilisome 31kDa rod-core linker polypeptide; PFAM: Phycobilisome linker domain; SPTR: Phycobilisome rod-core linker polypeptide CpcG1; Belongs to the phycobilisome linker protein family.
  
   
 0.816
AFZ12697.1
PFAM: Phycobilisome Linker polypeptide; CpcD/allophycocyanin linker domain; InterPro IPR001297:IPR008213; KEGG: cyh:Cyan8802_3043 phycobilisome linker polypeptide; PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; SPTR: Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
 
   
 0.813
AFZ12815.1
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.801
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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