STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ12494.1KEGG: syn:slr6073 hypothetical protein; SPTR: Putative uncharacterized protein. (487 aa)    
Predicted Functional Partners:
AFZ12492.1
KEGG: syn:slr6075 hypothetical protein; SPTR: Slr6016 protein.
       0.773
AFZ12493.1
Phospholipase D/Transphosphatidylase; InterPro IPR001736; KEGG: syn:slr6074 hypothetical protein; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Putative uncharacterized protein.
       0.773
AFZ12495.1
Hypothetical protein; PFAM: Domain of unknown function (DUF2357); KEGG: syn:slr6072 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ12496.1
ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG1196 Chromosome segregation ATPase; InterPro IPR011704; KEGG: syn:slr6071 hypothetical protein; PFAM: ATPase, AAA-5; SPTR: Putative uncharacterized protein.
       0.773
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.