STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ14412.1Transcriptional regulator, BadM/Rrf2 family; PFAM: Transcriptional regulator; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cyh:Cyan8802_3855 transcriptional regulator, BadM/Rrf2 family; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2. (147 aa)    
Predicted Functional Partners:
AFZ14413.1
PFAM: Glutathione-dependent formaldehyde-activating enzyme; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: cyc:PCC7424_1442 glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating, GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA.
       0.737
AFZ13868.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ava:Ava_0437 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aromatic amino acid beta-eliminating lyase/threonine aldolase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.710
AFZ13562.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: cyj:Cyan7822_0981 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V superfamily.
 
  
 0.691
AFZ15284.1
Modular FeS cluster scaffolding protein NifU; PFAM: NifU-like N terminal domain; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR011341:IPR002871; KEGG: cyn:Cyan7425_4473 SUF system FeS assembly protein, NifU family; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SPTR: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold.
  
  
 0.625
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.499
AFZ11210.1
PFAM: Tellurite resistance protein TerB; KEGG: ana:alr0821 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.495
AFZ12720.1
Nitric oxide synthase NOS; PFAM: Oxidoreductase FAD-binding domain; BFD-like [2Fe-2S] binding domain; Oxidoreductase NAD-binding domain; Nitric oxide synthase, oxygenase domain; COGs: COG4362 Nitric oxide synthase oxygenase domain; InterProIPR018248:IPR007419:IPR008333:IPR001433:IPR 004030:IPR002048; KEGG: scl:sce1582 nitric-oxide synthase, oxygenase subunit; PFAM: Nitric oxide synthase, oxygenase domain; Oxidoreductase, FAD-binding domain; BFD-like [2Fe-2S]-binding domain; EF-hand; Oxidoreductase FAD/NAD(P)-binding; SPTR: Nitric-oxide synthase, oxygenase subunit.
     
 0.471
AFZ14411.1
KEGG: ter:Tery_1859 transcriptional regulator AbrB; SPTR: Transcriptional regulator AbrB.
       0.452
AFZ14415.1
Peptidoglycan-binding domain 1 protein; PFAM: Putative peptidoglycan binding domain; COGs: COG3409 Putative peptidoglycan-binding domain-containing protein; InterPro IPR002477; KEGG: ana:all2941 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: All2941 protein.
 
     0.423
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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