STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ15000.1Hypothetical protein; COGs: COG1106 ATPase; KEGG: cyn:Cyan7425_2148 hypothetical protein; SPTR: Abortive infection protein, putative. (428 aa)    
Predicted Functional Partners:
AFZ15001.1
KEGG: cyn:Cyan7425_2149 abortive phage resistance protein; SPTR: Putative uncharacterized protein.
 
     0.951
AFZ11557.1
KEGG: npu:Npun_AF204 transposase, IS4 family protein; SPTR: Transposase, IS4 family protein.
  
  
 0.667
AFZ13672.1
PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: npu:Npun_R4578 fibronectin-binding A domain-containing protein; PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; SPTR: Fibronectin-binding protein A domain protein.
  
  
 0.643
AFZ14999.1
InterPro IPR019734:IPR001440; KEGG: hau:Haur_5268 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein.
       0.443
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.