STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY67530.1KEGG: mar:MAE_45100 hypothetical protein; SPTR: Genome sequencing data, contig C319. (279 aa)    
Predicted Functional Partners:
AFY66031.1
KEGG: mar:MAE_47070 hypothetical protein; SPTR: Genome sequencing data, contig C324.
  
     0.697
AFY66922.1
KEGG: mar:MAE_46730 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.664
AFY66492.1
PFAM: Protein of unknown function (DUF3352); InterPro IPR000215; KEGG: amr:AM1_3750 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.572
AFY66517.1
PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: mar:MAE_41540 hypothetical protein; PFAM: polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein.
  
     0.546
AFY67073.1
KEGG: amr:AM1_2976 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.535
cpcT-3
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.509
AFY66040.1
KEGG: mar:MAE_49990 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.502
AFY67531.1
PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cyn:Cyan7425_5154 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; manually curated.
       0.486
Your Current Organism:
Geitlerinema sp. PCC7407
NCBI taxonomy Id: 1173025
Other names: G. sp. PCC 7407, Geitlerinema sp. ATCC 29126, Geitlerinema sp. CPCC 99, Geitlerinema sp. PCC 7407
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