STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ18465.1PFAM: Peptidase family M48. (585 aa)    
Predicted Functional Partners:
AFZ18769.1
Putative S-layer protein; PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; Belongs to the OprB family.
  
     0.462
AFZ20620.1
Putative ABC-type transport system, permease component; PFAM: Exopolysaccharide synthesis, ExoD.
  
     0.458
AFZ18464.1
Hypothetical protein.
       0.443
AFZ20619.1
Putative ABC-type transport system, permease component; PFAM: Exopolysaccharide synthesis, ExoD.
  
     0.439
AFZ19034.1
Hypothetical protein.
  
     0.431
AFZ16793.1
Hypothetical protein.
 
     0.419
AFZ20495.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
  
   
 0.419
AFZ17479.1
Hypothetical protein.
  
     0.418
AFZ21949.1
PFAM: Outer membrane efflux protein.
  
     0.405
AFZ21722.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Microcoleus sp. PCC7113
NCBI taxonomy Id: 1173027
Other names: Allocoleopsis franciscanus PCC 7113, M. sp. PCC 7113, Microcoleus sp. PCC 7113, Oscillatoria sp. Mc
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.