STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ19417.1Hypothetical protein. (633 aa)    
Predicted Functional Partners:
AFZ21431.1
Hypothetical protein.
  
     0.770
AFZ18497.1
Hypothetical protein.
  
     0.754
AFZ16632.1
Hypothetical protein.
  
     0.743
AFZ20247.1
Hypothetical protein.
  
   0.730
AFZ16531.1
Hypothetical protein.
  
     0.715
AFZ17878.1
Hypothetical protein.
  
     0.705
AFZ16555.1
PFAM: Putative phospholipid-binding domain.
  
     0.699
AFZ16556.1
PFAM: Putative phospholipid-binding domain.
  
     0.699
AFZ17876.1
Hypothetical protein.
  
     0.689
AFZ20250.1
PFAM: Protein of unknown function (DUF1822).
  
 
   0.653
Your Current Organism:
Microcoleus sp. PCC7113
NCBI taxonomy Id: 1173027
Other names: Allocoleopsis franciscanus PCC 7113, M. sp. PCC 7113, Microcoleus sp. PCC 7113, Oscillatoria sp. Mc
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.