STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X4R8annotation not available (453 aa)    
Predicted Functional Partners:
A0A0J9X9M3
Belongs to the universal ribosomal protein uS5 family.
    
 
 0.811
A0A0J9X3A9
Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.
   
  
 0.623
A0A0J9X9Q2
Belongs to the universal ribosomal protein uS5 family.
    
 
 0.589
A0A0J9YHG4
annotation not available
   
  
 0.551
A0A0J9X853
Similar to Saccharomyces cerevisiae YKL143W LTV1 Component of the GSE complex.
   
  
 0.545
A0A0J9X6W1
Uncharacterized protein.
   
  
 0.481
A0A0J9XD81
annotation not available
   
  
 0.444
A0A0J9XK74
annotation not available
   
 
 0.444
A0A0J9X7B0
annotation not available
   
 
 0.442
A0A0J9X618
annotation not available
   
  
 0.431
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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