STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X6E5annotation not available (246 aa)    
Predicted Functional Partners:
A0A0J9XEY0
annotation not available
   
 
 0.936
A0A0J9XEJ7
annotation not available
   
   0.929
A0A0J9XLD6
annotation not available
   
 
 0.927
A0A0J9X6Z5
Belongs to the universal ribosomal protein uL16 family.
   
  0.925
A0A0J9XB81
annotation not available
    
 
 0.922
A0A0J9X2M6
annotation not available
   
 
 0.917
A0A0J9X7X7
Belongs to the universal ribosomal protein uL11 family.
   
 
 0.916
A0A0J9X7C3
annotation not available
   
   0.915
A0A0J9XIX9
Belongs to the universal ribosomal protein uL13 family.
   
 
 0.915
A0A0J9XIE1
annotation not available
   
   0.910
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.