STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9X7H3Similar to Saccharomyces cerevisiae YKL122C SRP21 Subunit of the signal recognition particle (SRP). (121 aa)    
Predicted Functional Partners:
A0A0J9X8L1
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.999
A0A0J9XBZ5
Similar to Saccharomyces cerevisiae YML105C SEC65 Subunit of the signal recognition particle (SRP).
   
 0.999
A0A0J9XDW6
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 0.999
A0A0J9XH36
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.999
A0A0J9X816
annotation not available
   
 0.915
A0A0J9XDC3
Similar to Saccharomyces cerevisiae YOL127W RPL25 Ribosomal 60S subunit protein L25; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.892
A0A0J9XC80
Belongs to the universal ribosomal protein uL22 family.
   
   0.891
A0A0F7RSL5
annotation not available
    
   0.890
A0A0J9X8S8
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.890
A0A0J9XCV0
annotation not available
    
   0.890
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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