STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J9XI56Similar to Saccharomyces cerevisiae YMR096W SNZ1 Protein involved in vitamin B6 biosynthesis; Belongs to the PdxS/SNZ family. (309 aa)    
Predicted Functional Partners:
A0A0J9XIS7
Uncharacterized protein.
 0.999
A0A0J9XK01
Similar to Saccharomyces cerevisiae YBR035C PDX3 Pyridoxine (Pyridoxamine) phosphate oxidase.
    
 0.850
A0A0J9X7A8
annotation not available
   
 0.846
A0A0J9X2M2
Similar to Saccharomyces cerevisiae YEL029C BUD16 Putative pyridoxal kinase.
   
 0.845
A0A0J9X7H2
Similar to Saccharomyces cerevisiae YHR062C RPP1 Subunit of both RNase MRP and nuclear RNase P.
    
 0.837
A0A0J9X746
Similar to Saccharomyces cerevisiae YNL221C POP1 Subunit of both RNase MRP and nuclear RNase P.
     
 0.822
A0A0J9XIC8
Ribonuclease P protein subunit.
     
 0.822
A0A0J9X2V4
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.812
A0A0J9XLB1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.799
RBK1
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.796
Your Current Organism:
Geotrichum candidum
NCBI taxonomy Id: 1173061
Other names: ATCC 22600 [[Endomyces geotrichum]], CBS 615.84 [[Galactomyces candidus]], CBS 772.71 [[Endomyces geotrichum]], Dipodascus geotrichum, Endomyces geotrichum, G. candidum, Galactomyces candidum, Galactomyces candidus, Galactomyces candidus de Hoog & M.T. Smith, 2004, Galactomyces geotrichum, Geotrichum sp. S9, JCM 6359 [[Endomyces geotrichum]], NRRL Y-17569 [[Endomyces geotrichum]], Oospora lactis
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