STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY72751.1PFAM: Protein kinase domain. (615 aa)    
Predicted Functional Partners:
AFY73779.1
Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE).
 
   0.813
AFY72523.1
PFAM: Protein phosphatase 2C.
  
   0.811
AFY72261.1
PFAM: Protein phosphatase 2C.
  
   0.792
AFY72492.1
Putative hydrocarbon binding protein (contains V4R domain); PFAM: V4R domain.
 
     0.554
AFY74550.1
Hypothetical protein.
 
     0.554
AFY74635.1
Putative hydrocarbon binding protein (contains V4R domain); PFAM: V4R domain.
 
   
 0.546
AFY72750.1
Prepilin signal peptidase PulO-like peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.532
AFY72286.1
PFAM: Phycobilisome protein.
  
     0.504
AFY73807.1
Putative hydrocarbon binding protein (contains V4R domain); PFAM: V4R domain.
 
   
 0.480
AFY72752.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP.
  
    0.466
Your Current Organism:
Synechococcus sp. PCC7502
NCBI taxonomy Id: 1173263
Other names: S. sp. PCC 7502, Synechococcus sp. PCC 7502, Synechococcus sp. Rippka_B2
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