STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GWL_34290Hypothetical protein. (162 aa)    
Predicted Functional Partners:
GWL_34270
Hypothetical protein.
 
  
 0.982
GWL_34280
Hypothetical protein.
 
  
 0.982
GWL_34320
Hypothetical protein.
 
  
 0.961
GWL_34310
Hypothetical protein.
 
  
 0.952
GWL_34300
Hypothetical protein.
 
  
 0.941
GWL_34260
ClpA/B-type chaperone protein; Belongs to the ClpA/ClpB family.
 
  
 0.937
GWL_34250
VGR-related type VI secretion system protein.
 
  
 0.928
GWL_34360
Transmembrane protein.
 
  
 0.915
GWL_34340
Transmembrane protein.
 
  
 0.914
GWL_34160
Hypothetical protein.
 
  
 0.906
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.