STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF20025.1Hemoglobin/transferrin/lactoferrin receptor protein. (792 aa)    
Predicted Functional Partners:
SFF11897.1
Protein TonB.
 
 
 0.815
SFE34528.1
Cell division and transport-associated protein TolA.
  
 
 0.784
SFE65992.1
Outer membrane transport energization protein TonB.
  
 
 0.784
SFE66929.1
TonB family C-terminal domain-containing protein.
  
 
 0.784
SFE76553.1
Outer membrane transport energization protein TonB.
  
 
 0.784
SFE91137.1
Hypothetical protein.
  
 
 0.784
SFE28410.1
Hypothetical protein.
  
 
 0.753
SFE95318.1
YXWGXW repeat-containing protein.
    
 
 0.728
SFF24107.1
YXWGXW repeat-containing protein.
    
 
 0.728
SFF20036.1
EF hand.
       0.572
Your Current Organism:
Acidovorax wautersii
NCBI taxonomy Id: 1177982
Other names: A. wautersii, Acidovorax sp. NF1078, Acidovorax sp. NF1598, Acidovorax sp. NF1715, Acidovorax wautersii Vaneechoutte et al. 2013, CCUG 62584, DSM 27981, LMG 26971, LMG:26971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.