STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ02274.1Protein of unknown function. (319 aa)    
Predicted Functional Partners:
SHI57410.1
Mechanosensitive ion channel.
 
     0.656
SHJ10745.1
Hypothetical protein.
  
     0.649
SHI86985.1
Hypothetical protein.
  
     0.610
SHJ02296.1
Phosphoribosylformylglycinamidine cyclo-ligase.
       0.571
SHI49221.1
Membrane protein YfhO.
  
     0.560
SHI32689.1
Hypothetical protein.
  
     0.482
SHI42385.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.463
SHI97780.1
Putative porin.
  
     0.450
SHJ02247.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.448
SHI41524.1
Hypothetical protein.
  
     0.447
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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