STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0141Putative protein; tr|K2R7B3|K2R7B3_METFO;evalue=2e-068; PctID=54.68; score=268; {ECO:0000313|EMBL:EKF87107,1}. (809 aa)    
Predicted Functional Partners:
ecfA
Putative ABC transporter ATP-binding protein MTBMA_c05830; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
    0.522
ecfA-2
Putative ABC transporter ATP-binding protein MTBMA_c05830; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
    0.522
yxaL
Putative protein YxaL; Increases the processivity of the PcrA helicase, but does not bind to DNA. interaction with PcrA is not essential for cell viability or repair of UV-induced lesions. Sequence=BAA21591.1; Type=Frameshift; Positions=180; Evidence=; sp|P42111|YXAL_BACSU;evalue=3e-008; PctID=32.14; score=60.8.
 
    
0.499
MCBB_0140
sp|P15636|API_ACHLY;evalue=2e-011; PctID=34.75; score=70.9.
 
    
0.434
mdh
NAD-dependent methanol dehydrogenase; Catalyzes the oxidation of methanol to yield formaldehyde. It possesses a NADH-dependent formaldehyde reductase activity and can not use NADP. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence=; requires the presence of magnesium ions. Inhibited by 1,10-phenanthroline. Kinetic parameters: KM=9 uM for NADH; KM=0.02 mM for NAD; KM=0.7 mM for formaldehyde (without activator protein at pH 9.5 and 50 degrees Celsius); KM=2 mM for formaldehyde (with activator protein at pH 9.5 and 50 degrees Celsius); KM=57 mM [...]
  
    0.408
dhaT
1,3-propanediol dehydrogenase; Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate. + NADH. Name=Fe cation; Xref=ChEBI:CHEBI:24875; family; sp|P45513|DHAT_CITFR;evalue=4e-074; PctID=37.20; score=278.
  
    0.408
zupT
Zinc transporter ZupT; Mediates zinc uptake. May also transport other divalent cations. Rule:MF_00548}; Multi-pass membrane protein subfamily; sp|B1HYT6|ZUPT_LYSSC;evalue=2e-007; PctID=22.96; score=56.6; {ECO:0000255|HAMAP-Rule:MF_00548}.
 
    0.404
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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