STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_0271Putative protein; tr|F6D204|F6D204_METPW;evalue=4e-104; PctID=71.64; score=384; {ECO:0000313|EMBL:AEG17293,1}. (275 aa)    
Predicted Functional Partners:
MCBB_0272
Regulatory protein MarR; tr|F6D205|F6D205_METPW;evalue=5e-073; PctID=85.28; score=279; {ECO:0000313|EMBL:AEG17294,1}.
 
     0.900
MCBB_0273
Flavodoxin; tr|K6TP02|K6TP02_9EURY;evalue=7e-073; PctID=74.71; score=279; {ECO:0000313|EMBL:EKQ53670,1}.
 
     0.808
MCBB_0269
Transcriptional activator ligand binding domain protein; tr|F6D202|F6D202_METPW;evalue=1e-071; PctID=87.50; score=274; {ECO:0000313|EMBL:AEG17291,1}.
 
     0.512
MCBB_0270
RDD domain containing protein; tr|F6D203|F6D203_METPW;evalue=1e-051; PctID=62.35; score=207; {ECO:0000313|EMBL:AEG17292,1}.
       0.454
MCBB_1774
Methyltransferase type 12; tr|F6D5V3|F6D5V3_METPW;evalue=1e-064; PctID=65.61; score=251; {ECO:0000313|EMBL:AEG18906,1}.
  
     0.449
MCBB_0274
CDP-alcohol phosphatidyltransferase; tr|F6D207|F6D207_METPW;evalue=3e-053; PctID=59.15; score=213; {ECO:0000313|EMBL:AEG17296,1}; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.432
MCBB_0295
Transcription activator effector binding protein; tr|F6D215|F6D215_METPW;evalue=9e-049; PctID=59.21; score=198; {ECO:0000313|EMBL:AEG17304,1}.
  
     0.417
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.