STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCBB_2299Putative protein MJ0609; sp|Q58026|Y609_METJA;evalue=8e-082; PctID=38.03; score=304. (435 aa)    
Predicted Functional Partners:
truB
Putative tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.
   
 
 0.652
MCBB_0772
Putative LRR receptor-like serine/threonine-protein kinase At1g06840; sp|C0LGD7|Y1684_ARATH;evalue=2e-014; PctID=31.48; score=82.0.
    
 0.631
stp3
Multidrug resistance protein Stp; sp|P9WG90|STP_MYCTO;evalue=2e-031; PctID=25.11; score=137.
  
 
 0.609
tarI
Putative ribitol-5-phosphate cytidylyltransferase; Provides activated ribitol phosphate for teichoic acid synthesis. CDP-ribitol. acid biosynthesis; sp|Q8RKI9|TARI_BACPZ;evalue=1e-075; PctID=56.22; score=282.
  
  
 0.486
menG
Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). = a menaquinol + S-adenosyl-L-homocysteine. menaquinol from 1,4-dihydroxy-2-naphthoate: step 2/2. methyltransferase superfamily. MenG/UbiE family; sp|O86169|MENG_GEOSE;evalue=7e-012; PctID=32.46; score=70.1; {ECO:0000255|HAMAP-Rule:MF_01813}.
       0.408
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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