STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX77797.1[J] COG3277 RNA-binding protein involved in rRNA processing. (122 aa)    
Predicted Functional Partners:
EDX76877.1
Adenoviral fiber protein (repeat/shaft region).
  
     0.766
EDX76285.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.763
EDX77567.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.752
EDX74565.1
Phytochelatin synthase family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.706
EDX78264.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.677
EDX76998.1
Conserved domain protein; [R] COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif.
  
     0.608
EDX77590.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
       0.572
EDX77116.1
Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
     0.498
EDX77214.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.460
EDX77814.1
Phytochelatin synthase family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.456
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.