STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12259COMM domain-containing protein 10. (166 aa)    
Predicted Functional Partners:
N307_03253
COMM domain-containing protein 2.
   
 0.984
N307_08972
COMM domain-containing protein 5.
   
 0.961
N307_02867
COMM domain-containing protein 7.
   
 0.958
N307_03916
COMM domain-containing protein 6.
   
 0.940
N307_04493
COMM domain-containing protein 9.
   
 0.914
N307_10846
COMM domain-containing protein 4.
    
 0.910
N307_11388
Coiled-coil domain-containing protein 93.
    
 
 0.906
N307_14850
Interferon-related developmental regulator 2.
    
 0.835
N307_07481
Interferon-related developmental regulator 1.
    
 0.835
N307_06193
DnaJ subfamily C member 2.
    
 0.730
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.