STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00307Carbonic anhydrase 7. (252 aa)    
Predicted Functional Partners:
N307_00197
60S ribosomal protein L5.
    
 
 0.656
N307_01095
Ribosome production factor 2.
   
 
 0.603
N307_08030
p2Y purinoceptor 1; Belongs to the G-protein coupled receptor 1 family.
   
    0.588
N307_14687
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.582
N307_11459
Cell division cycle and apoptosis regulator protein 1.
      
 0.565
N307_11481
Bromodomain-containing protein 9.
      
 0.510
N307_04635
Carbonic anhydrase 3.
  
  
 
0.502
N307_04636
Carbonic anhydrase 2.
  
  
0.501
N307_04633
Carbonic anhydrase 13.
  
  
0.500
N307_04634
Carbonic anhydrase 3; Belongs to the alpha-carbonic anhydrase family.
  
  
 
0.499
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.