STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01966Alpha-mannosidase. (759 aa)    
Predicted Functional Partners:
N307_13472
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
    
 0.905
N307_10899
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
     
 0.898
N307_09606
Alpha-mannosidase.
  
  
 
0.836
N307_08670
Alpha-mannosidase.
     
0.762
N307_10848
Alpha-mannosidase 2C1.
     
 0.690
N307_08467
Protein unc-79.
      
 0.581
N307_06240
Coatomer subunit beta.
 
      0.460
N307_12215
Tyrosine-protein kinase Fer.
 
 
 
  0.437
N307_04780
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
     
 0.436
N307_10974
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.420
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.