STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11916SRSF protein kinase 2. (615 aa)    
Predicted Functional Partners:
N307_02959
Cell division cycle 5-like.
    
   0.889
N307_04146
Serine/arginine-rich splicing factor 4.
    
 0.879
N307_02084
Serine/arginine-rich splicing factor 4.
    
 0.879
N307_04484
Serine/arginine-rich splicing factor 5.
    
 0.879
N307_13116
Serine/arginine-rich splicing factor 2.
    
 0.872
N307_09416
Serine/arginine-rich splicing factor 3.
    
 0.842
N307_11352
Zinc finger protein 318.
    
 0.829
N307_07877
Serine/arginine-rich splicing factor 7.
    
 0.813
N307_10731
RNA-binding protein 39.
    
 
 0.764
N307_05020
U1 small nuclear ribonucleoprotein 70 kDa.
    
 0.701
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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