STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11218Tetraspanin. (247 aa)    
Predicted Functional Partners:
N307_04073
Hepatocyte growth factor receptor.
    
  0.738
N307_09669
Tetraspanin.
     
0.700
N307_01701
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.519
N307_09245
Tumor susceptibility 101.
      
 0.516
N307_09484
Growth hormone-inducible transmembrane protein; Belongs to the BI1 family.
      
 0.504
N307_02169
Prostaglandin F2 receptor negative regulator.
    
 
 0.489
N307_06519
Disintegrin and metalloproteinase domain-containing protein 10.
    
 0.488
N307_05098
Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family.
    
  0.488
N307_09767
Interleukin-7 receptor subunit alpha.
   
 
 0.430
N307_03089
Interleukin-10 receptor subunit alpha.
   
 
  0.425
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.