STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB33650.1DNA polymerase subunit beta. (104 aa)    
Predicted Functional Partners:
APB33649.1
Hypothetical protein.
 
    0.953
APB34488.1
Hypothetical protein.
  
    0.787
APB35043.1
Hypothetical protein.
  
    0.785
APB34641.1
Zn-dependent alcohol dehydrogenase.
  
    0.767
APB34642.1
DNA polymerase beta domain-containing protein.
  
     0.757
APB34489.1
Putative nucleotidyltransferase.
  
     0.732
APB32373.1
Putative nucleotidyltransferase.
  
     0.525
APB33651.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits.
       0.450
hemZ-1
Radical SAM domain-containing protein.
       0.450
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.