STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifSNitrogen fixation protein NifS. (381 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation protein NifU.
  
 0.999
trxB
Thioredoxin reductase.
  
 
 0.949
rluB
Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
       0.822
hlyA
Hemolysin A.
       0.822
MOVI_5490
Hypothetical protein, putative transcription termination factor NusB.
       0.822
MOVI_5480
Hypothetical protein.
       0.794
MOVI_5430
Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.676
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
  
    0.542
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.508
MOVI_2150
Hypothetical protein, predicted transmembrane protein.
  
 
 0.473
Your Current Organism:
Mycoplasma ovipneumoniae
NCBI taxonomy Id: 1188239
Other names: M. ovipneumoniae 14811, Mycoplasma ovipneumoniae 14811
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