STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_00915COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (252 aa)    
Predicted Functional Partners:
A200_05877
ABC transporter substrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.983
A200_04341
Hypothetical protein.
  
 
 0.595
A200_00905
COG3152 Predicted membrane protein.
       0.569
A200_00910
COG3152 Predicted membrane protein.
       0.558
A200_00695
COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.548
A200_01731
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.548
A200_02216
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.548
A200_02479
Hypothetical protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.548
A200_02579
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.548
A200_03579
Antibiotic transport system ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.548
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.