STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70974.1Peptidase M6, immune inhibitor A. (804 aa)    
Predicted Functional Partners:
CCH70750.1
Acetyltransferase.
  
     0.738
CCH68830.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.592
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.563
CCH70545.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
  0.552
CCH69060.1
Putative ArsR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.545
CCH68773.1
Secreted subtilisin-like protease; Belongs to the peptidase S8 family.
  
    0.535
CCH70121.1
Acetyltransferase.
  
    0.528
CCH70217.1
Putative beta-lactamase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
  0.486
CCH71506.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.426
CCH70281.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.421
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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