STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN28804.1Alkaline phosphatase. (888 aa)    
Predicted Functional Partners:
AHN28805.1
Cyclolysin secretion ATP-binding protein.
 
  
 0.849
AHN28806.1
Alkaline protease secretion protein AprE.
 
  
 0.786
AHN28940.1
Hypothetical protein.
  
  
 0.467
AHN28803.1
Hypothetical protein.
       0.414
AHN27799.1
Membrane protein with DUF350 domain.
  
     0.402
Your Current Organism:
Snodgrassella alvi wkB2
NCBI taxonomy Id: 1196094
Other names: Candidatus Snodgrassella alvi wkB2, S. alvi wkB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.