STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHN25663.1Transcriptional regulator in PFGI-1-like cluster. (68 aa)    
Predicted Functional Partners:
AHN25662.1
Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like.
 
     0.787
AHN25661.1
Integrase.
 
  
 0.769
AHN25021.1
Phage integrase; Belongs to the 'phage' integrase family.
 
  
 0.720
AHN25843.1
Prophage integrase.
 
  
 0.717
AHN26851.1
Prophage integrase.
 
  
 0.714
AHN26865.1
Integrase.
 
   
 0.714
AHN27251.1
Type IV secretory pathway, VirB4 components.
 
     0.682
AHN27283.1
Hypothetical protein.
  
    0.644
AHN27259.1
Type IV secretory pathway, VirD4 components.
 
     0.582
AHN26859.1
DNA primase, phage-associated / Replicative helicase RepA.
 
     0.545
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.