STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpiATranscriptional regulatory protein CitB, DpiA. (236 aa)    
Predicted Functional Partners:
AHN26762.1
Sensor kinase CitA, DpiB.
 0.996
AHN25083.1
Two-component sensor histidine kinase, malate.
 
 0.889
AHN26763.1
Malate Na(+) symporter.
 
    0.639
AHN25085.1
Malate Na(+) symporter.
 
    0.526
AHN26760.1
Glutathione S-transferase domain protein.
       0.469
AHN26758.1
Cysteine ABC transporter, ATP-binding protein.
       0.433
AHN26759.1
Amino acid ABC transporter permease protein.
       0.433
AHN26757.1
Hypothetical protein.
       0.414
Your Current Organism:
Gilliamella apicola
NCBI taxonomy Id: 1196095
Other names: ATCC BAA-2448, Candidatus Gilliamella apicola, G. apicola, Gilliamella apicola Kwong and Moran 2013, NCIMB 14804, strain wkB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.