Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADW67123.1 | ADW67125.1 | AciX9_0032 | AciX9_0034 | KEGG: aca:ACP_2051 hypothetical protein. | KEGG: aca:ACP_0844 hypothetical protein. | 0.403 |
ADW67125.1 | ADW67123.1 | AciX9_0034 | AciX9_0032 | KEGG: aca:ACP_0844 hypothetical protein. | KEGG: aca:ACP_2051 hypothetical protein. | 0.403 |
ADW67125.1 | ADW67965.1 | AciX9_0034 | AciX9_0897 | KEGG: aca:ACP_0844 hypothetical protein. | PFAM: PAS fold-4 domain protein; KEGG: cpi:Cpin_0108 PAS/PAC sensor signal transduction histidine kinase. | 0.441 |
ADW67125.1 | ADW68883.1 | AciX9_0034 | AciX9_1836 | KEGG: aca:ACP_0844 hypothetical protein. | KEGG: aba:Acid345_0317 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.574 |
ADW67125.1 | ADW70451.1 | AciX9_0034 | AciX9_3446 | KEGG: aca:ACP_0844 hypothetical protein. | PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_0239 FAD dependent oxidoreductase. | 0.445 |
ADW67125.1 | ADW70692.1 | AciX9_0034 | AciX9_3691 | KEGG: aca:ACP_0844 hypothetical protein. | KEGG: sus:Acid_3429 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. | 0.504 |
ADW67125.1 | glyA | AciX9_0034 | AciX9_0033 | KEGG: aca:ACP_0844 hypothetical protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.610 |
ADW67965.1 | ADW67125.1 | AciX9_0897 | AciX9_0034 | PFAM: PAS fold-4 domain protein; KEGG: cpi:Cpin_0108 PAS/PAC sensor signal transduction histidine kinase. | KEGG: aca:ACP_0844 hypothetical protein. | 0.441 |
ADW68883.1 | ADW67125.1 | AciX9_1836 | AciX9_0034 | KEGG: aba:Acid345_0317 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | KEGG: aca:ACP_0844 hypothetical protein. | 0.574 |
ADW68883.1 | ADW70451.1 | AciX9_1836 | AciX9_3446 | KEGG: aba:Acid345_0317 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_0239 FAD dependent oxidoreductase. | 0.436 |
ADW70451.1 | ADW67125.1 | AciX9_3446 | AciX9_0034 | PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_0239 FAD dependent oxidoreductase. | KEGG: aca:ACP_0844 hypothetical protein. | 0.445 |
ADW70451.1 | ADW68883.1 | AciX9_3446 | AciX9_1836 | PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_0239 FAD dependent oxidoreductase. | KEGG: aba:Acid345_0317 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.436 |
ADW70692.1 | ADW67125.1 | AciX9_3691 | AciX9_0034 | KEGG: sus:Acid_3429 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. | KEGG: aca:ACP_0844 hypothetical protein. | 0.504 |
glyA | ADW67125.1 | AciX9_0033 | AciX9_0034 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | KEGG: aca:ACP_0844 hypothetical protein. | 0.610 |