STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW67125.1KEGG: aca:ACP_0844 hypothetical protein. (158 aa)    
Predicted Functional Partners:
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.610
ADW68883.1
KEGG: aba:Acid345_0317 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.574
ADW70692.1
KEGG: sus:Acid_3429 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
     0.504
ADW70451.1
PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_0239 FAD dependent oxidoreductase.
  
     0.445
ADW67965.1
PFAM: PAS fold-4 domain protein; KEGG: cpi:Cpin_0108 PAS/PAC sensor signal transduction histidine kinase.
  
     0.441
ADW67123.1
KEGG: aca:ACP_2051 hypothetical protein.
 
     0.403
Your Current Organism:
Granulicella tundricola
NCBI taxonomy Id: 1198114
Other names: G. tundricola MP5ACTX9, Granulicella sp. MP5ACTX9, Granulicella tundricola MP5ACTX9, Granulicella tundricola str. MP5ACTX9, Granulicella tundricola strain MP5ACTX9
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