STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW69191.1PFAM: protein of unknown function DUF820; KEGG: sus:Acid_1913 hypothetical protein. (177 aa)    
Predicted Functional Partners:
ADW67985.1
KEGG: cyn:Cyan7425_0572 protein of unknown function DUF820; manually curated; PFAM: protein of unknown function DUF820.
  
     0.729
ADW67991.1
PFAM: protein of unknown function DUF820; KEGG: cyn:Cyan7425_0572 protein of unknown function DUF820.
  
     0.720
ADW67992.1
PFAM: protein of unknown function DUF820; KEGG: cyn:Cyan7425_0572 protein of unknown function DUF820.
  
     0.718
ADW68187.1
PFAM: metallophosphoesterase; KEGG: sus:Acid_5668 metallophosphoesterase.
  
     0.604
ADW70058.1
KEGG: srm:SRM_00747 conserved hypothetical protein containing PIN domain.
  
     0.584
ADW67651.1
PFAM: WD40-like beta Propeller containing protein; KEGG: aba:Acid345_0896 hypothetical protein.
  
     0.580
ADW68979.1
KEGG: sus:Acid_6245 hypothetical protein.
  
     0.580
ADW70527.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: sus:Acid_6138 TPR repeat-containing protein.
  
     0.573
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.552
ADW70704.1
KEGG: aca:ACP_1799 hypothetical protein.
  
     0.542
Your Current Organism:
Granulicella tundricola
NCBI taxonomy Id: 1198114
Other names: G. tundricola MP5ACTX9, Granulicella sp. MP5ACTX9, Granulicella tundricola MP5ACTX9, Granulicella tundricola str. MP5ACTX9, Granulicella tundricola strain MP5ACTX9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.