STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2M30_0413Unannotated protein. (314 aa)    
Predicted Functional Partners:
D2M30_0412
Unannotated protein.
 
  
 0.989
C1T26_19515
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.989
D2M30_0410
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.989
D2M30_1106
Unannotated protein.
  
  
0.619
D2M30_3479
Unannotated protein.
 
  
 0.580
D2M30_3443
Unannotated protein.
 
  
 0.555
D2M30_3482
Unannotated protein.
  
  
0.466
D2M30_4142
Unannotated protein.
  
  
0.437
D2M30_3467
Unannotated protein.
 
  
 0.403
D2M30_0209
Unannotated protein.
  
  
0.401
Your Current Organism:
Bacillus amyloliquefaciens DC12
NCBI taxonomy Id: 1198291
Other names: B. amyloliquefaciens DC-12, Bacillus amyloliquefaciens DC-12, Bacillus amyloliquefaciens subsp. amyloliquefaciens DC-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.