STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A606_03090Hypothetical protein; COG0500 SAM-dependent methyltransferases. (389 aa)    
Predicted Functional Partners:
A606_09785
COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.869
A606_06360
Alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.
  
 
 0.801
A606_03095
COG1396 Predicted transcriptional regulators.
 
    0.779
A606_10080
COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.682
A606_10480
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.682
A606_08185
Hypothetical protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 
 0.678
A606_04380
COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
  
 0.636
A606_09600
Molybdopterin biosynthesis protein MoeB; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
  
 0.636
A606_03955
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.634
A606_03980
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.634
Your Current Organism:
Corynebacterium terpenotabidum
NCBI taxonomy Id: 1200352
Other names: C. terpenotabidum Y-11, Corynebacterium terpenotabidum CIP 105927, Corynebacterium terpenotabidum DSM 44721, Corynebacterium terpenotabidum IFO 14764, Corynebacterium terpenotabidum Y-11
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