STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0972TonB-dependent receptor plug domain protein. (636 aa)    
Predicted Functional Partners:
M900_2006
TonB-dependent receptor plug domain protein.
  
     0.774
M900_2007
TonB-dependent receptor.
   
 
 0.727
M900_2104
TolA C-terminal domain protein.
   
 
 0.727
M900_2731
TonB-dependent receptor.
   
 
 0.727
EQC47989.1
TonB-dependent receptor.
   
 
 0.727
M900_2103
Putative Tol-Pal system beta propeller repeat protein TolB.
    
 
 0.683
M900_0523
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
    
   0.652
M900_1921
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
    
   0.652
soj
Sporulation initiation inhibitor protein Soj.
    
   0.652
EQC44360.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
    
   0.652
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.