STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysSUnannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (468 aa)    
Predicted Functional Partners:
IV41_GL000089
Unannotated protein.
 
 
 0.988
mrnC
Unannotated protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
  
 0.971
IV41_GL000534
Unannotated protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
 
 
 0.959
IV41_GL000142
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.948
IV41_GL000088
Unannotated protein.
  
 0.948
serS
Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
 
 0.827
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.792
leuS
Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.778
nusG
Unannotated protein; Participates in transcription elongation, termination and antitermination.
     
 0.772
metG
Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
 
  
 0.727
Your Current Organism:
Lactobacillus ingluviei
NCBI taxonomy Id: 1203076
Other names: L. ingluviei str. Autruche 4, Lactobacillus ingluviei Autruche 4, Lactobacillus ingluviei str. Autruche 4, Lactobacillus ingluviei strain Autruche 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.