STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF73519.1Serine/threonine protein kinase. (406 aa)    
Predicted Functional Partners:
SHG79868.1
Zinc-ribbon domain-containing protein.
  
 
 
 0.938
SHG24051.1
Protein phosphatase.
 0.887
SHG99306.1
Protein phosphatase.
 0.887
SHG98892.1
Protein kinase domain-containing protein.
  
     0.775
SHG31813.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
    
 0.665
SHG23991.1
Inner membrane component of T3SS domain-containing protein.
 
 
 
 0.618
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.616
SHH48306.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 
    0.607
SHG60349.1
Serine/threonine protein kinase.
 
 
0.600
SHG24140.1
Serine/threonine protein kinase.
 
 
0.599
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.