STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG02433.1Putative ABC transport system permease protein. (842 aa)    
Predicted Functional Partners:
SHG02401.1
Putative ABC transport system ATP-binding protein.
 
 
 0.974
SHF55422.1
Putative ABC transport system ATP-binding protein; Manually curated.
 
 
 0.828
SHH54928.1
Putative ABC transport system ATP-binding protein.
 
 
 0.669
SHF55388.1
Putative ABC transport system permease protein.
 
  
  0.623
SHF59554.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.586
SHG02475.1
Hypothetical protein.
       0.553
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.532
SHG02015.1
Phage shock protein C (PspC) family protein.
 
    0.478
SHF83537.1
Suppressor of fused protein (SUFU).
  
     0.464
SHG19023.1
Transcriptional regulator, TetR family.
  
     0.441
Your Current Organism:
Jatrophihabitans endophyticus
NCBI taxonomy Id: 1206085
Other names: DSM 45627, Frankia sp. S9-650, J. endophyticus, Jatrophihabitans endophyticus Madhaiyan et al. 2013, KACC 16232, strain S9-650
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.