STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308595_06264Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000308595_06229
Unannotated protein.
 
 0.978
GCA_000308595_05015
Unannotated protein.
 
 0.932
GCA_000308595_00942
Unannotated protein.
  
 0.931
GCA_000308595_02568
Unannotated protein.
 
 
 
 0.929
GCA_000308595_02410
Unannotated protein.
  
0.763
GCA_000308595_05162
Unannotated protein.
  
 0.763
GCA_000308595_04466
Unannotated protein.
  
 0.744
GCA_000308595_01476
Unannotated protein.
  
 
 0.724
GCA_000308595_01347
Unannotated protein.
    
 0.710
GCA_000308595_02939
Unannotated protein.
    
 0.687
Your Current Organism:
Nocardia higoensis
NCBI taxonomy Id: 1206730
Other names: N. higoensis NBRC 100133, Nocardia higoensis NBRC 100133, Nocardia higoensis str. NBRC 100133, Nocardia higoensis strain NBRC 100133
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.