STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (423 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase ArgH.
 
 
 0.999
argF
Ornithine carbamoyltransferase ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.999
carB
Carbamoyl-phosphate synthase large chain CarB; Belongs to the CarB family.
 
 0.996
argH2
Argininosuccinate lyase 2.
 
 
 0.995
argH1
Argininosuccinate lyase 1.
 
 
 0.994
argB
Acetylglutamate kinase ArgB; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
  
 0.991
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
 
  
 0.976
argD1
Acetylornithine aminotransferase ArgD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
 0.970
gltB
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.954
pyrAA
Carbamoyl-phosphate synthase pyrimidine-specific small chain; Belongs to the CarA family.
 
 
 0.954
Your Current Organism:
Paenibacillus alvei
NCBI taxonomy Id: 1206781
Other names: P. alvei DSM 29, Paenibacillus alvei ATCC 6344, Paenibacillus alvei DSM 29, Paenibacillus alvei IFO 3343
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