STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJW18112.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
prsW
Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.
 
     0.860
EJW18111.1
Hypothetical protein.
       0.773
mecA1
Adapter protein mecA 1; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
 
     0.735
EJW15691.1
Hypothetical protein.
  
     0.675
EJW18115.1
Putative glycosyltransferase.
       0.651
EJW15645.1
Hypothetical protein.
  
     0.580
ypeB1
Sporulation protein YpeB.
       0.573
ypeB2
Sporulation protein YpeB.
       0.573
EJW18992.1
TPR repeat-containing protein.
  
     0.497
EJW17718.1
Hypothetical protein.
  
     0.473
Your Current Organism:
Paenibacillus alvei
NCBI taxonomy Id: 1206781
Other names: P. alvei DSM 29, Paenibacillus alvei ATCC 6344, Paenibacillus alvei DSM 29, Paenibacillus alvei IFO 3343
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.