STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mutS2Protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (787 aa)    
Predicted Functional Partners:
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
 
0.916
EJW16763.1
Protein MutS2.
  
  
 
0.886
EJW16525.1
Hypothetical protein.
  
  
 0.819
rpsD
30S ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family.
    
   0.796
EJW17511.1
Fibronectin-binding A domain protein.
 
     0.745
EJW16527.1
Hypothetical protein.
       0.735
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
 
 
   0.725
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
  
 
   0.684
EJW16524.1
Hypothetical protein.
       0.682
EJW16528.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
       0.664
Your Current Organism:
Paenibacillus alvei
NCBI taxonomy Id: 1206781
Other names: P. alvei DSM 29, Paenibacillus alvei ATCC 6344, Paenibacillus alvei DSM 29, Paenibacillus alvei IFO 3343
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