STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO21159.1GntR family transcriptional regulator. (253 aa)    
Predicted Functional Partners:
CDO22607.1
GntR family transcriptional regulator.
  
     0.773
CDO26920.1
Transcriptional regulator.
  
     0.773
CDO19579.1
GntR family transcriptional regulator.
  
     0.772
CDO22694.1
GntR family transcriptional regulator.
  
     0.772
CDO23388.1
Transcriptional regulator.
  
     0.772
CDO25652.1
Transcriptional regulator.
  
     0.772
CDO25237.1
Transcriptional regulator.
  
     0.771
CDO19636.1
GntR family transcriptional regulator.
  
     0.770
CDO26994.1
GntR family transcriptional regulator.
  
     0.769
CDO20422.1
GntR family transcriptional regulator.
  
     0.767
Your Current Organism:
Mycolicibacterium mageritense
NCBI taxonomy Id: 1209984
Other names: M. mageritense DSM 44476 = CIP 104973, Mycobacterium mageritense 938, Mycobacterium mageritense ATCC 700351, Mycobacterium mageritense CCUG 37984, Mycobacterium mageritense CIP 104973, Mycobacterium mageritense DSM 44476, Mycobacterium mageritense DSM 44476 = CIP 104973, Mycolicibacterium mageritense CIP 104973 = DSM 44476, Mycolicibacterium mageritense DSM 44476 = CIP 104973
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.