STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000531095_03831Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000531095_07483
Unannotated protein.
  
  
 0.635
GCA_000531095_03832
Unannotated protein.
       0.590
GCA_000531095_01878
Unannotated protein.
 
    0.556
GCA_000531095_03830
Unannotated protein.
 
     0.512
GCA_000531095_04555
Unannotated protein.
 
   
 0.503
GCA_000531095_00608
Unannotated protein.
 
  
 0.475
GCA_000531095_04019
Unannotated protein.
 
  
 0.438
GCA_000531095_03893
Unannotated protein.
 
     0.427
Your Current Organism:
Gemmata massiliana
NCBI taxonomy Id: 1210884
Other names: CSUR P189, DSM 26013, G. massiliana, Gemmata sp. IIL30, strain IIL30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.