E0VJ76_PEDHC protein (Pediculus humanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E0VJ76_PEDHC

Nuclear receptor-binding factor, putative. (176 aa)

Predicted Functional Partners:

E0VQ65_PEDHC

0.997

E0W167_PEDHC

0.997

E0VSM0_PEDHC

0.993

E0VUY6_PEDHC

0.973

E0VTR8_PEDHC

0.935

E0VIV8_PEDHC

0.823

E0W246_PEDHC

0.548

E0VSF9_PEDHC

0.520

E0VSR9_PEDHC

0.497

E0W0V2_PEDHC

0.418

Your Current Organism:

Pediculus humanus

NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0VIV8_PEDHC	E0VJ76_PEDHC	E0VIV8	E0VJ76	Serine/threonine-protein kinase ULK2, putative.	Nuclear receptor-binding factor, putative.	0.823
E0VIV8_PEDHC	E0VQ65_PEDHC	E0VIV8	E0VQ65	Serine/threonine-protein kinase ULK2, putative.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.989
E0VIV8_PEDHC	E0VSM0_PEDHC	E0VIV8	E0VSM0	Serine/threonine-protein kinase ULK2, putative.	Beclin, putative.	0.999
E0VIV8_PEDHC	E0VTR8_PEDHC	E0VIV8	E0VTR8	Serine/threonine-protein kinase ULK2, putative.	Protein NUF1, putative.	0.998
E0VIV8_PEDHC	E0VUY6_PEDHC	E0VIV8	E0VUY6	Serine/threonine-protein kinase ULK2, putative.	Phosphoinositide 3-kinase regulatory subunit, putative.	0.989
E0VIV8_PEDHC	E0W0V2_PEDHC	E0VIV8	E0W0V2	Serine/threonine-protein kinase ULK2, putative.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.998
E0VIV8_PEDHC	E0W167_PEDHC	E0VIV8	E0W167	Serine/threonine-protein kinase ULK2, putative.	Uncharacterized protein.	0.996
E0VIV8_PEDHC	E0W246_PEDHC	E0VIV8	E0W246	Serine/threonine-protein kinase ULK2, putative.	Uncharacterized protein.	0.516
E0VJ76_PEDHC	E0VIV8_PEDHC	E0VJ76	E0VIV8	Nuclear receptor-binding factor, putative.	Serine/threonine-protein kinase ULK2, putative.	0.823
E0VJ76_PEDHC	E0VQ65_PEDHC	E0VJ76	E0VQ65	Nuclear receptor-binding factor, putative.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.997
E0VJ76_PEDHC	E0VSF9_PEDHC	E0VJ76	E0VSF9	Nuclear receptor-binding factor, putative.	cAMP-dependent protein kinase catalytic subunit, putative.	0.520
E0VJ76_PEDHC	E0VSM0_PEDHC	E0VJ76	E0VSM0	Nuclear receptor-binding factor, putative.	Beclin, putative.	0.993
E0VJ76_PEDHC	E0VSR9_PEDHC	E0VJ76	E0VSR9	Nuclear receptor-binding factor, putative.	Uncharacterized protein.	0.497
E0VJ76_PEDHC	E0VTR8_PEDHC	E0VJ76	E0VTR8	Nuclear receptor-binding factor, putative.	Protein NUF1, putative.	0.935
E0VJ76_PEDHC	E0VUY6_PEDHC	E0VJ76	E0VUY6	Nuclear receptor-binding factor, putative.	Phosphoinositide 3-kinase regulatory subunit, putative.	0.973
E0VJ76_PEDHC	E0W0V2_PEDHC	E0VJ76	E0W0V2	Nuclear receptor-binding factor, putative.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.418
E0VJ76_PEDHC	E0W167_PEDHC	E0VJ76	E0W167	Nuclear receptor-binding factor, putative.	Uncharacterized protein.	0.997
E0VJ76_PEDHC	E0W246_PEDHC	E0VJ76	E0W246	Nuclear receptor-binding factor, putative.	Uncharacterized protein.	0.548
E0VQ65_PEDHC	E0VIV8_PEDHC	E0VQ65	E0VIV8	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Serine/threonine-protein kinase ULK2, putative.	0.989
E0VQ65_PEDHC	E0VJ76_PEDHC	E0VQ65	E0VJ76	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Nuclear receptor-binding factor, putative.	0.997