STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0VTF6_PEDHCPSP domain-containing protein. (524 aa)    
Predicted Functional Partners:
E0VNV8_PEDHC
RRM domain-containing protein.
    
 
 0.977
E0VI02_PEDHC
Helicase, putative.
    
 
 0.944
E0VE88_PEDHC
Exosome complex exonuclease RRP43, putative.
    
 
 0.638
E0VZC4_PEDHC
Exosome complex exonuclease RRP42, putative.
   
 
 0.620
E0VZL3_PEDHC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 
 0.613
E0VDQ7_PEDHC
Uncharacterized protein.
      
 0.562
E0VKH4_PEDHC
Spliceosome associated protein, putative.
      
 0.552
E0VWX4_PEDHC
Uncharacterized protein.
   
  
 0.527
E0VJK6_PEDHC
WD-repeat protein, putative.
   
  
 0.517
E0VRG1_PEDHC
Ig-like domain-containing protein.
      
 0.497
Your Current Organism:
Pediculus humanus
NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse
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